[←][→] ath   AT5G18900 Gene
functional annotation
Function   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein  
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (12 genes)  IBA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0000137 [list] [network] Golgi cis cisterna  (41 genes)  HDA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (12 genes)  IBA  
GO:0031418 [list] [network] L-ascorbic acid binding  (23 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (281 genes)  IEA  
KEGG ath00330 [list] [network] Arginine and proline metabolism (54 genes)
Protein NP_197391.1 
BLAST NP_197391.1 
Orthologous [Ortholog page] P4H2 (ath)  LOC7469094 (ppo)  LOC11417773 (mtr)  LOC11437832 (mtr)  LOC100245913 (vvi)  LOC100282945 (zma)  LOC100783075 (gma)  LOC100796794 (gma)  LOC100818794 (gma)  LOC100820606 (gma)  LOC101244118 (sly)  LOC101265933 (sly)  LOC103845801 (bra)  LOC103851199 (bra)  LOC103854470 (bra)  LOC103859149 (bra) 
Subcellular
localization
wolf
chlo 4,  vacu 3,  chlo_mito 3  (predict for NP_197391.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_197391.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 3
ath01200 Carbon metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 2
ath01230 Biosynthesis of amino acids 2
Genes directly connected with AT5G18900 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AT1G54320 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein [detail] 841873
5.8 AUD1 NAD(P)-binding Rossmann-fold superfamily protein [detail] 825458
5.7 AT4G38790 ER lumen protein retaining receptor family protein [detail] 830034
5.7 ACBP2 acyl-CoA binding protein 2 [detail] 828891
Coexpressed
gene list		 [Coexpressed gene list for AT5G18900]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249957_at
249957_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249957_at
249957_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249957_at
249957_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832008      
Refseq ID (protein) NP_197391.1 


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