[←][→] ath   AT5G21160 Gene
functional annotation
Function   LA RNA-binding protein  
GO BP
GO:0061014 [list] [network] positive regulation of mRNA catabolic process  (6 genes)  IGI  
GO:0070370 [list] [network] cellular heat acclimation  (10 genes)  IEP  
GO:0010286 [list] [network] heat acclimation  (53 genes)  IMP  
GO:0006402 [list] [network] mRNA catabolic process  (80 genes)  IMP  
GO CC
GO:0005844 [list] [network] polysome  (10 genes)  IDA  
GO:0010494 [list] [network] cytoplasmic stress granule  (20 genes)  IDA  
GO:0000932 [list] [network] P-body  (56 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA TAS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001190354.1  NP_001190355.1  NP_568409.1 
BLAST NP_001190354.1  NP_001190355.1  NP_568409.1 
Orthologous [Ortholog page] LOC4324370 (osa)  LOC7467966 (ppo)  LOC7489321 (ppo)  LOC11435207 (mtr)  LOC100193028 (zma)  LOC100254731 (vvi)  LOC100780505 (gma)  LOC100813202 (gma)  LOC101245852 (sly)  LOC103845604 (bra)  LOC103851404 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001190354.1)
nucl 9  (predict for NP_001190355.1)
nucl 9  (predict for NP_568409.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190354.1)
other 9  (predict for NP_001190355.1)
other 9  (predict for NP_568409.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with LARP1a on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 NOXY38 tetratricopeptide repeat (TPR)-containing protein [detail] 824378
7.0 EMB2753 tetratricopeptide repeat (TPR)-containing protein [detail] 844381
6.3 AT5G05450 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 830428
Coexpressed
gene list		 [Coexpressed gene list for LARP1a]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246031_at
246031_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246031_at
246031_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246031_at
246031_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832242      
Refseq ID (protein) NP_001190354.1 
NP_001190355.1 
NP_568409.1 


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