ATTED-II : GeneID search result

[←][→] ath AT5G22030 Gene

functional annotation

Function

ubiquitin-specific protease 8

GO BP

GO:0016579 [list] [network] protein deubiquitination	(48 genes)	IEA
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process	(436 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(10793 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0036459 [list] [network] thiol-dependent ubiquitinyl hydrolase activity

(51 genes)

IEA

KEGG

Protein

NP_001318617.1 NP_568411.4

BLAST

NP_001318617.1 NP_568411.4

Orthologous

[Ortholog page] LOC4352817 (osa) LOC7470598 (ppo) LOC11422624 (mtr) LOC100247876 (vvi) LOC100252957 (vvi) LOC100776553 (gma) LOC100817733 (gma) LOC101262018 (sly) LOC103650275 (zma) LOC103845578 (bra) LOC103856492 (bra)

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, cyto 1	(predict for NP_001318617.1)
nucl 7, cyto_nucl 4, cyto 1	(predict for NP_568411.4)

Subcellular
localization
TargetP

other 8, chlo 3	(predict for NP_001318617.1)
other 8, chlo 3	(predict for NP_568411.4)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2

Genes directly connected with UBP8 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.7	UBP10	ubiquitin-specific protease 10	[detail]	826651
6.4	AT3G45630	RNA binding (RRM/RBD/RNP motifs) family protein	[detail]	823705
5.6	PP2A-3	protein phosphatase 2A-3	[detail]	818850

Coexpressed
gene list

[Coexpressed gene list for UBP8]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245683_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245683_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245683_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	832263
Refseq ID (protein)	NP_001318617.1
Refseq ID (protein)	NP_568411.4

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