[←][→] ath   AT5G22950 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0070676 [list] [network] intralumenal vesicle formation  (5 genes)  IDA  
GO:0032509 [list] [network] endosome transport via multivesicular body sorting pathway  (18 genes)  IBA  
GO:0045324 [list] [network] late endosome to vacuole transport  (27 genes)  IBA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IBA  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (11 genes)  IBA ISS  
GO:0005771 [list] [network] multivesicular body  (20 genes)  IBA  
GO:0005770 [list] [network] late endosome  (91 genes)  IDA  
GO:0010008 [list] [network] endosome membrane  (162 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_197686.1 
BLAST NP_197686.1 
Orthologous [Ortholog page] VPS24.2 (ath)  LOC4331337 (osa)  LOC4343227 (osa)  LOC7494932 (ppo)  LOC25492378 (mtr)  LOC100216894 (zma)  LOC100260253 (vvi)  LOC100273289 (zma)  LOC100780989 (gma)  LOC100781929 (gma)  LOC100797244 (gma)  LOC100817500 (gma)  LOC101259117 (sly)  LOC101268191 (sly)  LOC103845498 (bra)  LOC103856542 (bra) 
Subcellular
localization
wolf
cyto 6,  cysk_nucl 1,  nucl 1,  chlo 1,  pero 1,  cysk 1  (predict for NP_197686.1)
Subcellular
localization
TargetP
other 8  (predict for NP_197686.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
Genes directly connected with VPS24.1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 CEN2 centrin2 [detail] 824198
7.9 I-2 phosphoprotein phosphatase inhibitor [detail] 835296
7.8 AT3G52220 leukocyte immunoglobulin-like receptor family A protein [detail] 824387
7.0 AT1G75510 Transcription initiation factor IIF, beta subunit [detail] 843887
7.0 AT5G59210 myosin heavy chain-like protein [detail] 836039
6.8 AT1G16210 coiled-coil protein [detail] 838189
6.5 AT2G39170 MEF2BNB-like protein [detail] 818502
6.2 AT5G46620 hypothetical protein [detail] 834705
5.6 VPS2.3 vacuolar protein sorting-associated protein 2.3 [detail] 839362
5.2 AT1G54460 TPX2 (targeting protein for Xklp2) protein family [detail] 841888
Coexpressed
gene list		 [Coexpressed gene list for VPS24.1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249863_at
249863_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249863_at
249863_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249863_at
249863_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832359      
Refseq ID (protein) NP_197686.1 


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