[←][→] ath   AT5G23570 Gene
functional annotation
Function   XS domain-containing protein / XS zinc finger domain-containing protein-like protein  
GO BP
GO:0010050 [list] [network] vegetative phase change  (10 genes)  IMP  
GO:0009616 [list] [network] virus induced gene silencing  (12 genes)  IMP  
GO:0050688 [list] [network] regulation of defense response to virus  (13 genes)  IEA  
GO:0010267 [list] [network] production of ta-siRNAs involved in RNA interference  (15 genes)  IMP  
GO:0010025 [list] [network] wax biosynthetic process  (23 genes)  IGI  
GO:0051607 [list] [network] defense response to virus  (44 genes)  IMP  
GO:0016032 [list] [network] viral process  (63 genes)  IEA  
GO CC
GO:0048471 [list] [network] perinuclear region of cytoplasm  (23 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
KEGG
Protein NP_001331490.1  NP_001331491.1  NP_001331492.1  NP_197747.1 
BLAST NP_001331490.1  NP_001331491.1  NP_001331492.1  NP_197747.1 
Orthologous [Ortholog page] LOC4351724 (osa)  LOC4351726 (osa)  LOC7462821 (ppo)  LOC11419957 (mtr)  LOC11430341 (mtr)  LOC11435052 (mtr)  LOC100037819 (zma)  SGS3 (sly)  LOC100245878 (vvi)  LOC100791535 (gma)  LOC100792019 (gma)  LOC100796906 (gma)  LOC100803356 (gma)  LOC100804352 (gma)  LOC100805844 (gma)  LOC100807738 (gma)  LOC103628871 (zma)  LOC103650615 (zma)  LOC103874228 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_001331490.1)
nucl 8,  cyto 1,  plas 1,  pero 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001331491.1)
nucl 6,  cyto 2,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_001331492.1)
nucl 8,  cyto 1,  plas 1,  pero 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_197747.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331490.1)
other 8  (predict for NP_001331491.1)
other 8  (predict for NP_001331492.1)
other 8  (predict for NP_197747.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SGS3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 FDM5 XH/XS domain-containing protein [detail] 844418
5.9 SDE3 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 837047
5.6 KTF1 kow domain-containing transcription factor 1 [detail] 830308
Coexpressed
gene list		 [Coexpressed gene list for SGS3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249843_at
249843_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249843_at
249843_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249843_at
249843_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832422      
Refseq ID (protein) NP_001331490.1 
NP_001331491.1 
NP_001331492.1 
NP_197747.1 


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