[←][→] ath   AT5G24280 Gene
functional annotation
Function   gamma-irradiation and mitomycin c induced 1  
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001330245.1  NP_001330246.1  NP_197816.3 
BLAST NP_001330245.1  NP_001330246.1  NP_197816.3 
Orthologous [Ortholog page] LOC7464275 (ppo)  LOC11433315 (mtr)  LOC11434186 (mtr)  AT5G24275 (ath)  LOC100252197 (vvi)  LOC100815144 (gma)  LOC101253262 (sly)  LOC103874292 (bra)  LOC103874295 (bra) 
Subcellular
localization
wolf
nucl 5,  mito 3,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001330245.1)
nucl 5,  mito 3,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001330246.1)
chlo 4,  nucl 3,  E.R. 2,  cysk_nucl 2  (predict for NP_197816.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001330245.1)
other 8  (predict for NP_001330246.1)
other 8  (predict for NP_197816.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with GMI1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 NAC044 NAC domain containing protein 44 [detail] 819872
7.0 AT5G60250 zinc finger (C3HC4-type RING finger) family protein [detail] 836147
6.4 chr31 chromatin remodeling 31 [detail] 837051
6.4 NAC103 NAC domain containing protein 103 [detail] 836527
5.2 AT1G17960 Threonyl-tRNA synthetase [detail] 838375
4.9 AT4G38780 pre-mRNA-processing-splicing factor-like protein [detail] 830033
4.3 AT4G22960 FAM63A-like protein (DUF544) [detail] 828395
3.7 AT1G65150 TRAF-like family protein [detail] 842822
Coexpressed
gene list		 [Coexpressed gene list for GMI1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249784_at
249784_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249784_at
249784_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249784_at
249784_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832495      
Refseq ID (protein) NP_001330245.1 
NP_001330246.1 
NP_197816.3 


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