[][] ath   AT5G26760 Gene
functional annotation
Function   RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein
GO BP
GO:0070940 [list] [network] dephosphorylation of RNA polymerase II C-terminal domain  (14 genes)  IBA  
GO:0030154 [list] [network] cell differentiation  (695 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0008420 [list] [network] RNA polymerase II CTD heptapeptide repeat phosphatase activity  (17 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_198028.2  NP_974839.1 
BLAST NP_198028.2  NP_974839.1 
Orthologous [Ortholog page] LOC4337724 (osa)LOC7475177 (ppo)LOC25483637 (mtr)LOC100217208 (zma)LOC100258021 (vvi)LOC100800951 (gma)LOC100804112 (gma)LOC101260378 (sly)LOC103641346 (zma)LOC103854695 (bra)
Subcellular
localization
wolf
nucl 4,  golg 3,  cyto_nucl 3  (predict for NP_198028.2)
cyto 4,  nucl 3,  chlo 1,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1  (predict for NP_974839.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_198028.2)
other 8  (predict for NP_974839.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03050 Proteasome 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with AT5G26760 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.3 ADA2A ADA2 2A [detail] 819965
5.3 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit [detail] 839409
5.3 CUL4 cullin4 [detail] 834663
Coexpressed
gene list
[Coexpressed gene list for AT5G26760]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246846_at
246846_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246846_at
246846_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
246846_at
246846_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 832734    
Refseq ID (protein) NP_198028.2 
NP_974839.1 


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