[←][→] ath   AT5G26980 Gene
functional annotation
Function   syntaxin of plants 41  
GO BP
GO:0006906 [list] [network] vesicle fusion  (30 genes)  IBA  
GO:0048278 [list] [network] vesicle docking  (37 genes)  IBA  
GO:0061025 [list] [network] membrane fusion  (49 genes)  TAS  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IBA TAS  
GO CC
GO:0030140 [list] [network] trans-Golgi network transport vesicle  (15 genes)  TAS  
GO:0031201 [list] [network] SNARE complex  (32 genes)  IBA  
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IDA TAS  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  ISM  
GO:0012505 [list] [network] endomembrane system  (2531 genes)  IBA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IBA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (39 genes)  IBA TAS  
GO:0000149 [list] [network] SNARE binding  (54 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (44 genes)
Protein NP_001031950.1  NP_001331924.1  NP_198050.1 
BLAST NP_001031950.1  NP_001331924.1  NP_198050.1 
Orthologous [Ortholog page] SYP43 (ath)  SYP42 (ath)  LOC4339929 (osa)  LOC7460430 (ppo)  LOC7478916 (ppo)  LOC11407189 (mtr)  LOC25499622 (mtr)  LOC100191311 (zma)  LOC100192536 (zma)  LOC100248594 (vvi)  LOC100259549 (vvi)  LOC100789659 (gma)  LOC100796741 (gma)  LOC100797056 (gma)  LOC100803629 (gma)  LOC101263154 (sly)  LOC101265370 (sly)  LOC103836768 (bra)  LOC103849906 (bra)  LOC103870798 (bra) 
Subcellular
localization
wolf
chlo 4,  golg 2,  mito 1,  golg_plas 1  (predict for NP_001031950.1)
chlo 4,  golg 2,  mito 1,  golg_plas 1  (predict for NP_001331924.1)
chlo 4,  golg 2,  mito 1,  golg_plas 1  (predict for NP_198050.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001031950.1)
mito 9  (predict for NP_001331924.1)
mito 9  (predict for NP_198050.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath00565 Ether lipid metabolism 2
ath04144 Endocytosis 2
Genes directly connected with SYP41 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 PLDGAMMA2 phospholipase D gamma 2 [detail] 826789
5.6 AT3G57470 Insulinase (Peptidase family M16) family protein [detail] 824914
5.6 AT3G27610 Nucleotidylyl transferase superfamily protein [detail] 822383
5.0 TRM9 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 840048
5.0 AT5G20450 myosin [detail] 832167
4.6 AT1G34844 [detail] 5007752
4.5 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family [detail] 834092
4.4 AT5G49500 Signal recognition particle, SRP54 subunit protein [detail] 835010
4.3 AT1G51430 cTAGE family protein [detail] 841568
4.1 HSD3 hydroxysteroid dehydrogenase 3 [detail] 823890
Coexpressed
gene list		 [Coexpressed gene list for SYP41]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246803_at
246803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246803_at
246803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246803_at
246803_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832756      
Refseq ID (protein) NP_001031950.1 
NP_001331924.1 
NP_198050.1 


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