[←][→] ath   AT5G27610 Gene
functional annotation
Function   protein ALWAYS EARLY 1  
GO BP
GO:0006351 [list] [network] transcription, DNA-templated  (186 genes)  IEA  
GO:0051726 [list] [network] regulation of cell cycle  (216 genes)  IBA  
GO:0000003 [list] [network] reproduction  (1767 genes)  IBA  
GO CC
GO:0017053 [list] [network] transcriptional repressor complex  (13 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (2280 genes)  IBA  
KEGG
Protein NP_198113.2 
BLAST NP_198113.2 
Orthologous [Ortholog page] ALY2 (ath)  LOC103849006 (bra)  LOC103854663 (bra)  LOC103870828 (bra)  LOC103874522 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  cysk 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_198113.2)
Subcellular
localization
TargetP
other 6  (predict for NP_198113.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath03440 Homologous recombination 2
Genes directly connected with ALY1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 ATE2F2 winged-helix DNA-binding transcription factor family protein [detail] 841202
6.6 E2F1 E2F transcription factor 1 [detail] 832283
5.9 AT3G03970 ARM repeat superfamily protein [detail] 819552
5.9 AT5G02430 Transducin/WD40 repeat-like superfamily protein [detail] 831780
5.8 AT2G20110 Tesmin/TSO1-like CXC domain-containing protein [detail] 816530
5.2 RPA1A replication protein A 1A [detail] 815209
3.7 ACBP5 acyl-CoA binding protein 5 [detail] 832825
Coexpressed
gene list		 [Coexpressed gene list for ALY1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246790_at
246790_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246790_at
246790_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246790_at
246790_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832823      
Refseq ID (protein) NP_198113.2 


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