| functional annotation |
| Function |
carboxylate clamp-TPR protein (DUF1685) |
|
| GO BP |
|
GO:0043571 [list] [network] maintenance of CRISPR repeat elements
|
(1 genes)
|
IEA
|
 |
|
| GO CC |
|
| GO MF |
|
GO:0004521 [list] [network] endoribonuclease activity
|
(85 genes)
|
IEA
|
|
|
| KEGG |
|
|
| Protein |
NP_001331393.1
NP_001331394.1
NP_198221.1
|
| BLAST |
NP_001331393.1
NP_001331394.1
NP_198221.1
|
| Orthologous |
[Ortholog page]
AT3G04700 (ath)
AT1G08790 (ath)
LOC4335373 (osa)
LOC7474612 (ppo)
LOC25484630 (mtr)
LOC25499687 (mtr)
LOC100244447 (vvi)
LOC100276437 (zma)
LOC100305652 (gma)
LOC100784530 (gma)
LOC101258598 (sly)
LOC102667203 (gma)
LOC103836670 (bra)
LOC103849137 (bra)
LOC103859053 (bra)
LOC103871703 (bra)
LOC103874591 (bra)
|
Subcellular
localization
wolf |
|
nucl 7,
plas 1,
mito 1,
cysk 1,
golg_plas 1,
E.R._plas 1,
cyto_plas 1
|
(predict for NP_001331393.1)
|
|
nucl 7,
plas 1,
mito 1,
cysk 1,
golg_plas 1,
E.R._plas 1,
cyto_plas 1
|
(predict for NP_001331394.1)
|
|
nucl 7,
plas 1,
mito 1,
cysk 1,
golg_plas 1,
E.R._plas 1,
cyto_plas 1
|
(predict for NP_198221.1)
|
|
Subcellular
localization
TargetP |
|
chlo 4,
other 3,
mito 3
|
(predict for NP_001331393.1)
|
|
chlo 4,
other 3,
mito 3
|
(predict for NP_001331394.1)
|
|
chlo 4,
other 3,
mito 3
|
(predict for NP_198221.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00040 |
Pentose and glucuronate interconversions |
2 |
 |
Genes directly connected with AT5G28690 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 20.0 |
AT5G20390 |
Glycosyl hydrolase superfamily protein |
[detail] |
832161 |
| 19.2 |
RALFL8 |
ralf-like 8 |
[detail] |
842451 |
| 18.9 |
AT3G62710 |
Glycosyl hydrolase family protein |
[detail] |
825445 |
| 18.9 |
AT4G02250 |
Plant invertase/pectin methylesterase inhibitor superfamily protein |
[detail] |
827589 |
| 18.7 |
AT5G15110 |
Pectate lyase family protein |
[detail] |
831363 |
| 18.5 |
AT1G66210 |
Subtilisin-like serine endopeptidase family protein |
[detail] |
842936 |
| 18.2 |
RALFL15 |
RALF-like 15 |
[detail] |
28718292 |
| 18.1 |
RALFL9 |
ralf-like 9 |
[detail] |
842452 |
| 17.7 |
AT1G35490 |
bZIP family transcription factor |
[detail] |
840442 |
| 17.3 |
PRK2A |
Leucine-rich repeat protein kinase family protein |
[detail] |
815274 |
| 16.7 |
RALFL26 |
ralf-like 26 |
[detail] |
822109 |
| 15.7 |
RALFL4 |
ralf-like 4 |
[detail] |
839721 |
| 15.1 |
AT3G62180 |
Plant invertase/pectin methylesterase inhibitor superfamily protein |
[detail] |
825391 |
| 14.4 |
scpl38 |
serine carboxypeptidase-like 38 |
[detail] |
815137 |
| 14.1 |
APPB1 |
Plant invertase/pectin methylesterase inhibitor superfamily protein |
[detail] |
828566 |
| 9.8 |
BCP1 |
homolog of Brassica campestris pollen protein 1 |
[detail] |
839067 |
| 6.4 |
AT1G58120 |
hypothetical protein |
[detail] |
842179 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT5G28690]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AT5G28690 Gene
