ATTED-II : GeneID search result

[←][→] ath AT5G28850 Gene

functional annotation

Function

Calcium-binding EF-hand family protein

GO BP

GO:0006470 [list] [network] protein dephosphorylation

(133 genes)

IBA

GO CC

GO:0000159 [list] [network] protein phosphatase type 2A complex	(20 genes)	IBA
GO:0005829 [list] [network] cytosol	(3506 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0019888 [list] [network] protein phosphatase regulator activity	(43 genes)	IBA
GO:0005509 [list] [network] calcium ion binding	(242 genes)	IEA

KEGG

ath03015 [list] [network] mRNA surveillance pathway (115 genes)

Protein

NP_568509.1 NP_851089.1

BLAST

NP_568509.1 NP_851089.1

Orthologous

[Ortholog page] AT5G28900 (ath) AT5G44090 (ath) AT1G03960 (ath) AT1G54450 (ath) LOC4348893 (osa) LOC7476933 (ppo) LOC11434607 (mtr) LOC11435115 (mtr) LOC100246385 (vvi) LOC100250118 (vvi) LOC100792998 (gma) LOC100793000 (gma) LOC100799748 (gma) LOC100807531 (gma) LOC100815724 (gma) LOC101245749 (sly) LOC101251680 (sly) LOC103626168 (zma) LOC103643458 (zma) LOC103836595 (bra) LOC103837305 (bra) LOC103839205 (bra) LOC103844328 (bra) LOC103874595 (bra)

Subcellular
localization
wolf

nucl 5, cyto 4	(predict for NP_568509.1)
chlo 4, mito 2, cyto 1, plas 1, cyto_plas 1	(predict for NP_851089.1)

Subcellular
localization
TargetP

other 8	(predict for NP_568509.1)
scret 9	(predict for NP_851089.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

Genes directly connected with AT5G28850 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.9	AT5G28900	Calcium-binding EF-hand family protein	[detail]	833013
5.1	AT5G20660	Zn-dependent exopeptidases superfamily protein	[detail]	832189
5.1	AT1G12120	hypothetical protein (DUF863)	[detail]	837764

Coexpressed
gene list

Gene expression

All samples

The preparation time of this page was 0.6 [sec].