[←][→] ath   AT5G38510 Gene
functional annotation
Function   Rhomboid-related intramembrane serine protease family protein  
GO BP
GO:0006508 [list] [network] proteolysis  (901 genes)  IEA  
GO CC
GO:0031969 [list] [network] chloroplast membrane  (259 genes)  IEA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (93 genes)  IBA  
KEGG
Protein NP_001078681.1  NP_001330612.1  NP_198667.1 
BLAST NP_001078681.1  NP_001330612.1  NP_198667.1 
Orthologous [Ortholog page] LOC4329191 (osa)  LOC25479746 (mtr)  LOC100256693 (vvi)  LOC100275753 (zma)  LOC100808799 (gma)  LOC100815930 (gma)  LOC101248255 (sly)  LOC103850116 (bra)  LOC103863789 (bra) 
Subcellular
localization
wolf
nucl 4,  plas 3,  cyto_nucl 3,  chlo 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001078681.1)
nucl 4,  plas 3,  cyto_nucl 3,  chlo 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001330612.1)
nucl 4,  plas 3,  cyto_nucl 3,  chlo 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for NP_198667.1)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for NP_001078681.1)
chlo 5,  other 4  (predict for NP_001330612.1)
chlo 5,  other 4  (predict for NP_198667.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00195 Photosynthesis 2
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
ath00010 Glycolysis / Gluconeogenesis 2
ath00030 Pentose phosphate pathway 2
Genes directly connected with AT5G38510 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 AT4G12830 alpha/beta-Hydrolases superfamily protein [detail] 826895
7.1 FBA5 Aldolase superfamily protein [detail] 828759
7.1 RSH1 RELA/SPOT homolog 1 [detail] 828096
7.1 BGLU9 beta glucosidase 9 [detail] 828895
6.5 AT3G18500 DNAse I-like superfamily protein [detail] 821380
5.6 SHA1 RING/FYVE/PHD zinc finger superfamily protein [detail] 836498
Coexpressed
gene list		 [Coexpressed gene list for AT5G38510]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249510_at
249510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249510_at
249510_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249510_at
249510_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833839      
Refseq ID (protein) NP_001078681.1 
NP_001330612.1 
NP_198667.1 


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