[←][→] ath   AT5G39880 Gene
functional annotation
Function   transmembrane protein  
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_198804.1 
BLAST NP_198804.1 
Orthologous [Ortholog page] LOC103864031 (bra) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  extr 1  (predict for NP_198804.1)
Subcellular
localization
TargetP
scret 6,  chlo 3  (predict for NP_198804.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 3
Genes directly connected with AT5G39880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.2 AT3G07820 Pectin lyase-like superfamily protein [detail] 819973
20.2 CHX23 cation/H+ exchanger 23 [detail] 837063
19.8 VGDH1 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 819317
19.0 AT3G01240 splicing regulatory glutamine/lysine-rich-like protein [detail] 821219
17.7 sks14 SKU5 similar 14 [detail] 842005
17.4 AT3G01270 Pectate lyase family protein [detail] 821142
16.0 AT3G05610 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 819727
13.8 AT5G50830 nuclear polyadenylated RNA-binding protein [detail] 835155
12.8 AT5G45880 Pollen Ole e 1 allergen and extensin family protein [detail] 834628
11.3 BGAL11 beta-galactosidase 11 [detail] 829653
10.7 AT1G76370 Protein kinase superfamily protein [detail] 843969
10.6 EXL6 EXORDIUM like 6 [detail] 821168
10.3 AT5G50030 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 835067
9.7 AT2G16730 glycosyl hydrolase family 35 protein [detail] 816174
9.2 AT3G54800 Pleckstrin homology (PH) and lipid-binding START domains-containing protein [detail] 824645
9.0 AT3G02810 Protein kinase superfamily protein [detail] 821236
8.8 COBL10 COBRA-like protein 10 precursor [detail] 821605
8.6 AT3G28750 hypothetical protein [detail] 822507
7.5 ACA3 alpha carbonic anhydrase 3 [detail] 830296
7.2 AT4G18596 Pollen Ole e 1 allergen and extensin family protein [detail] 827593
6.8 GATL4 galacturonosyltransferase-like 4 [detail] 819800
6.7 AT5G47000 Peroxidase superfamily protein [detail] 834746
6.4 AT5G26700 RmlC-like cupins superfamily protein [detail] 832719
6.2 AT4G39610 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [detail] 830115
5.6 AT2G27180 hypothetical protein [detail] 817260
5.2 AT1G10770 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 837620
Coexpressed
gene list		 [Coexpressed gene list for AT5G39880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249429_at
249429_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249429_at
249429_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249429_at
249429_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833985      
Refseq ID (protein) NP_198804.1 


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