[←][→] ath   AT5G40580 Gene
functional annotation
Function   20S proteasome beta subunit PBB2  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO CC
GO:0005839 [list] [network] proteasome core complex  (24 genes)  TAS  
GO:0000502 [list] [network] proteasome complex  (80 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0004298 [list] [network] threonine-type endopeptidase activity  (23 genes)  IEA  
KEGG ath03050 [list] [network] Proteasome (60 genes)
Protein NP_001190443.1  NP_001318715.1  NP_198874.1  NP_851108.1 
BLAST NP_001190443.1  NP_001318715.1  NP_198874.1  NP_851108.1 
Orthologous [Ortholog page] PBB1 (ath)  LOC4338009 (osa)  LOC7470180 (ppo)  LOC7496649 (ppo)  LOC11426050 (mtr)  LOC11442392 (mtr)  LOC100216834 (zma)  LOC100249199 (vvi)  LOC100283485 (zma)  LOC100808133 (gma)  LOC100819784 (gma)  LOC101248875 (sly)  LOC101251571 (sly)  LOC103854234 (bra)  LOC103875216 (bra) 
Subcellular
localization
wolf
cyto 6,  cysk 3,  cyto_pero 3,  cyto_E.R. 3  (predict for NP_001190443.1)
cyto 6,  cysk 3,  cyto_pero 3,  cyto_E.R. 3  (predict for NP_001318715.1)
cyto 6,  cysk 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_198874.1)
cyto 6,  cysk 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_851108.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190443.1)
other 8  (predict for NP_001318715.1)
other 8  (predict for NP_198874.1)
other 8  (predict for NP_851108.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
Genes directly connected with PBB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.5 PBD2 20S proteasome beta subunit D2 [detail] 827135
12.5 PBF1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [detail] 825253
11.1 PAF1 proteasome alpha subunit F1 [detail] 834290
9.3 RPT5B 26S proteasome AAA-ATPase subunit RPT5B [detail] 837431
8.3 AT3G18860 transducin family protein / WD-40 repeat family protein [detail] 821419
7.5 AT2G03430 Ankyrin repeat family protein [detail] 814872
6.7 COP9 COP9 signalosome, subunit CSN8 [detail] 827049
Coexpressed
gene list		 [Coexpressed gene list for PBB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249374_at
249374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249374_at
249374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249374_at
249374_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834056      
Refseq ID (protein) NP_001190443.1 
NP_001318715.1 
NP_198874.1 
NP_851108.1 


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