[←][→] ath   AT5G42220 Gene
functional annotation
Function   Ubiquitin-like superfamily protein  
GO BP
GO:0030433 [list] [network] ubiquitin-dependent ERAD pathway  (36 genes)  IBA  
GO CC
GO:0071818 [list] [network] BAT3 complex  (3 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0051787 [list] [network] misfolded protein binding  (16 genes)  IBA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (23 genes)  IBA  
KEGG
Protein NP_001330299.1  NP_199037.2 
BLAST NP_001330299.1  NP_199037.2 
Orthologous [Ortholog page] LOC4343305 (osa)  LOC7494671 (ppo)  LOC7496884 (ppo)  LOC25482215 (mtr)  LOC100263131 (vvi)  LOC100285089 (zma)  LOC100783611 (gma)  LOC100811870 (gma)  LOC101252683 (sly)  LOC103838735 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001330299.1)
nucl 9  (predict for NP_199037.2)
Subcellular
localization
TargetP
other 8,  chlo 5  (predict for NP_001330299.1)
other 8,  chlo 5  (predict for NP_199037.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath04141 Protein processing in endoplasmic reticulum 3
ath04144 Endocytosis 2
Genes directly connected with AT5G42220 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT2G01600 ENTH/ANTH/VHS superfamily protein [detail] 814689
6.9 CDC48 cell division cycle 48 [detail] 820142
6.8 XRN4 exoribonuclease 4 [detail] 841891
6.7 WSIP2 WUS-interacting protein 2 [detail] 820831
6.0 AGO1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase [detail] 841262
Coexpressed
gene list		 [Coexpressed gene list for AT5G42220]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249240_at
249240_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249240_at
249240_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249240_at
249240_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834227      
Refseq ID (protein) NP_001330299.1 
NP_199037.2 


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