[←][→] ath   AT5G42310 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR-like) superfamily protein  
GO BP
GO:0010239 [list] [network] chloroplast mRNA processing  (8 genes)  IMP  
GO:0006417 [list] [network] regulation of translation  (146 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (44 genes)  IDA  
GO:0042651 [list] [network] thylakoid membrane  (391 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IEA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA ISM  
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (64 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_199046.1 
BLAST NP_199046.1 
Orthologous [Ortholog page] LOC732792 (zma)  LOC4343532 (osa)  LOC7494690 (ppo)  LOC7496866 (ppo)  LOC25490300 (mtr)  LOC100263329 (vvi)  LOC100778551 (gma)  LOC100808427 (gma)  LOC101245385 (sly)  LOC103862617 (bra) 
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_199046.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_199046.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G42310 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 FUG1 Translation initiation factor 2, small GTP-binding protein [detail] 838293
7.5 AT3G04760 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 819636
6.8 AT5G57960 GTP-binding protein, HflX [detail] 835907
4.4 CYP72A11 cytochrome P450, family 72, subfamily A, polypeptide 11 [detail] 820693
Coexpressed
gene list		 [Coexpressed gene list for AT5G42310]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249247_at
249247_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249247_at
249247_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249247_at
249247_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834236      
Refseq ID (protein) NP_199046.1 


The preparation time of this page was 0.2 [sec].