[←][→] ath   AT5G42400 Gene
functional annotation
Function   SET domain protein 25  
GO BP
GO:0010452 [list] [network] histone H3-K36 methylation  (4 genes)  IDA  
GO:0051568 [list] [network] histone H3-K4 methylation  (10 genes)  IGI ISS  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
KEGG
Protein NP_001318731.1  NP_001330664.1  NP_001330665.1  NP_001330666.1  NP_001330667.1  NP_001330668.1  NP_001330669.1  NP_001330670.1 
BLAST NP_001318731.1  NP_001330664.1  NP_001330665.1  NP_001330666.1  NP_001330667.1  NP_001330668.1  NP_001330669.1  NP_001330670.1 
Orthologous [Ortholog page] LOC4352779 (osa)  LOC7474532 (ppo)  LOC11437640 (mtr)  LOC100805708 (gma)  LOC100806034 (gma)  LOC101263241 (sly)  LOC103642258 (zma)  LOC103838745 (bra)  LOC104878403 (vvi) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001318731.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001330664.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001330665.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001330666.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001330667.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001330668.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001330669.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001330670.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_001318731.1)
other 5,  chlo 4  (predict for NP_001330664.1)
other 5,  chlo 4  (predict for NP_001330665.1)
other 5,  chlo 4  (predict for NP_001330666.1)
other 5,  chlo 4  (predict for NP_001330667.1)
other 5,  chlo 4  (predict for NP_001330668.1)
other 5,  chlo 4  (predict for NP_001330669.1)
other 5,  chlo 4  (predict for NP_001330670.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SDG25 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 CHR5 chromatin remodeling 5 [detail] 815823
7.7 SDG2 SET domain protein 2 [detail] 827183
7.6 PTM PHD type transcription factor with transmembrane domain protein (PTM) [detail] 833475
7.1 AT1G63490 transcription factor jumonji (jmjC) domain-containing protein [detail] 842655
4.7 RKF1 receptor-like kinase in flowers 1 [detail] 839853
Coexpressed
gene list		 [Coexpressed gene list for SDG25]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249219_at
249219_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249219_at
249219_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249219_at
249219_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834246      
Refseq ID (protein) NP_001318731.1 
NP_001330664.1 
NP_001330665.1 
NP_001330666.1 
NP_001330667.1 
NP_001330668.1 
NP_001330669.1 
NP_001330670.1 


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