[←][→] ath   AT5G42660 Gene
functional annotation
Function   DNA-directed RNA polymerase subunit beta (DUF616)  
GO BP
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity  (59 genes)  IEA  
GO:0016757 [list] [network] transferase activity, transferring glycosyl groups  (644 genes)  ISM  
KEGG
Protein NP_568609.2 
BLAST NP_568609.2 
Orthologous [Ortholog page] LOC4325554 (osa)  LOC7461726 (ppo)  LOC9266933 (osa)  LOC11414257 (mtr)  LOC100266014 (vvi)  LOC100285443 (zma)  LOC100285659 (zma)  LOC100780738 (gma)  LOC100812230 (gma)  LOC101245644 (sly)  LOC103857257 (bra) 
Subcellular
localization
wolf
nucl 3,  cyto 2,  chlo 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_568609.2)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for NP_568609.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
Genes directly connected with AT5G42660 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.2 AT4G17020 transcription factor-like protein [detail] 827410
5.2 AT1G04910 O-fucosyltransferase family protein [detail] 839373
5.1 AT4G34960 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [detail] 829648
Coexpressed
gene list		 [Coexpressed gene list for AT5G42660]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249160_at
249160_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249160_at
249160_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249160_at
249160_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834275      
Refseq ID (protein) NP_568609.2 


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