[←][→] ath   AT5G42970 Gene
functional annotation
Function   Proteasome component (PCI) domain protein  
GO BP
GO:0010971 [list] [network] positive regulation of G2/M transition of mitotic cell cycle  (5 genes)  IMP  
GO:0000338 [list] [network] protein deneddylation  (11 genes)  IMP  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IEA  
GO:0009640 [list] [network] photomorphogenesis  (71 genes)  TAS  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (12 genes)  IBA IDA IPI TAS  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO MF
GO:0019784 [list] [network] NEDD8-specific protease activity  (5 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_199111.1 
BLAST NP_199111.1 
Orthologous [Ortholog page] LOC4331948 (osa)  LOC25480548 (mtr)  LOC100192688 (zma)  LOC100254062 (vvi)  LOC100793394 (gma)  LOC100819593 (gma)  CSN4 (sly)  LOC103828002 (bra)  LOC103848572 (bra) 
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_199111.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199111.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with COP8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 COP13 Proteasome component (PCI) domain protein [detail] 831275
7.5 FUS6 COP9 signalosome complex subunit 1 [detail] 825286
7.5 AT1G66070 Translation initiation factor eIF3 subunit [detail] 842921
7.0 AT1G22200 Endoplasmic reticulum vesicle transporter protein [detail] 838825
5.5 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family protein [detail] 828017
Coexpressed
gene list		 [Coexpressed gene list for COP8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249175_at
249175_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249175_at
249175_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249175_at
249175_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834312      
Refseq ID (protein) NP_199111.1 


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