[←][→] ath   AT5G44560 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0032509 [list] [network] endosome transport via multivesicular body sorting pathway  (18 genes)  IBA  
GO:0045324 [list] [network] late endosome to vacuole transport  (27 genes)  IBA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IBA  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (11 genes)  IBA ISS  
GO:0005771 [list] [network] multivesicular body  (20 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001119371.1  NP_001332586.1  NP_001332587.1  NP_199269.1 
BLAST NP_001119371.1  NP_001332586.1  NP_001332587.1  NP_199269.1 
Orthologous [Ortholog page] LOC4333538 (osa)  LOC7490692 (ppo)  LOC25486687 (mtr)  LOC100259680 (vvi)  LOC100284170 (zma)  LOC100777179 (gma)  LOC100793101 (gma)  LOC103834159 (bra)  LOC103839171 (bra)  LOC104645908 (sly) 
Subcellular
localization
wolf
mito 4,  nucl 2,  cyto_mito 2,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001119371.1)
cyto_nucl 4,  nucl 4,  nucl_plas 4,  plas 2,  cyto 1,  chlo 1  (predict for NP_001332586.1)
cyto_nucl 5,  cyto 5,  nucl 3,  cysk_nucl 2  (predict for NP_001332587.1)
nucl 3,  mito 3,  nucl_plas 3,  chlo 1,  plas 1,  cyto_mito 1  (predict for NP_199269.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_001119371.1)
other 6  (predict for NP_001332586.1)
other 6  (predict for NP_001332587.1)
other 6  (predict for NP_199269.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VPS2.2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.8 SYP111 syntaxin of plants 111 [detail] 837378
10.4 AT3G14190 hypothetical protein [detail] 820636
10.0 AT4G02800 GRIP/coiled-coil protein [detail] 828171
Coexpressed
gene list		 [Coexpressed gene list for VPS2.2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249060_at
249060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249060_at
249060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249060_at
249060_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834483      
Refseq ID (protein) NP_001119371.1 
NP_001332586.1 
NP_001332587.1 
NP_199269.1 


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