ATTED-II : GeneID search result

[←][→] ath AT5G45500 Gene

functional annotation

Function

RNI-like superfamily protein

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

KEGG

Protein

NP_001190474.1 NP_001330029.1 NP_001330030.1 NP_001330031.1 NP_001330032.1 NP_001330033.1 NP_001330034.1 NP_001330035.1 NP_199363.3

BLAST

NP_001190474.1 NP_001330029.1 NP_001330030.1 NP_001330031.1 NP_001330032.1 NP_001330033.1 NP_001330034.1 NP_001330035.1 NP_199363.3

Orthologous

[Ortholog page] AT5G45520 (ath) LOC4325754 (osa) LOC4325836 (osa) LOC4333389 (osa) LOC4336247 (osa) LOC4350997 (osa) LOC4351001 (osa) LOC7497000 (ppo) LOC100243468 (vvi) LOC100258171 (vvi) LOC102660304 (gma) LOC102661060 (gma) LOC102662112 (gma) LOC102664151 (gma) LOC102664578 (gma) LOC102664817 (gma) LOC102666933 (gma) LOC103651108 (zma) LOC103827793 (bra) LOC103827797 (bra) LOC103853649 (bra) LOC104878912 (vvi) LOC106795247 (gma) LOC106796866 (gma) LOC106797059 (gma) LOC107276992 (osa)

Subcellular
localization
wolf

cyto 6, nucl 1, cysk 1, cysk_nucl 1	(predict for NP_001190474.1)
cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3	(predict for NP_001330029.1)
cyto 6, nucl 1, cysk 1, cysk_nucl 1	(predict for NP_001330030.1)
cyto 6, nucl 2, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330031.1)
cyto 6, nucl 1, cysk 1, cysk_nucl 1	(predict for NP_001330032.1)
cyto 6, nucl 2, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330033.1)
cyto 6, nucl 2, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330034.1)
cyto 6, nucl 2, chlo 1, plas 1, cysk 1, cysk_plas 1	(predict for NP_001330035.1)
cyto 6, nucl 1, cysk 1, cysk_nucl 1	(predict for NP_199363.3)

Subcellular
localization
TargetP

other 6, mito 3	(predict for NP_001190474.1)
other 5	(predict for NP_001330029.1)
other 6, mito 3	(predict for NP_001330030.1)
other 7	(predict for NP_001330031.1)
other 6, mito 3	(predict for NP_001330032.1)
other 7	(predict for NP_001330033.1)
other 7	(predict for NP_001330034.1)
other 6	(predict for NP_001330035.1)
other 6, mito 3	(predict for NP_199363.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G45500 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
21.8	AT5G45490	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[detail]	834585
20.8	AT5G45510	Leucine-rich repeat (LRR) family protein	[detail]	834587
7.1	maMYB	Duplicated homeodomain-like superfamily protein	[detail]	834578
3.6	AT1G65985	transmembrane protein, putative (DUF247)	[detail]	842911

Coexpressed
gene list

[Coexpressed gene list for AT5G45500]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248944_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248944_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248944_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834586
Refseq ID (protein)	NP_001190474.1
	NP_001330029.1
	NP_001330030.1
	NP_001330031.1
	NP_001330032.1
	NP_001330033.1
	NP_001330034.1
	NP_001330035.1
	NP_199363.3

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