ATTED-II : GeneID search result

[←][→] ath AT5G45830 Gene

functional annotation

Function

delay of germination 1

GO BP

GO:2000033 [list] [network] regulation of seed dormancy process	(13 genes)	IMP
GO:0010162 [list] [network] seed dormancy process	(32 genes)	IMP
GO:0010182 [list] [network] sugar mediated signaling pathway	(37 genes)	IMP
GO:0006351 [list] [network] transcription, DNA-templated	(186 genes)	IEA
GO:0009738 [list] [network] abscisic acid-activated signaling pathway	(194 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IEA ISM

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding

(796 genes)

IEA

KEGG

Protein

NP_001318745.1 NP_001330540.1 NP_001330541.1 NP_001330542.1 NP_001330543.1 NP_199395.2

BLAST

NP_001318745.1 NP_001330540.1 NP_001330541.1 NP_001330542.1 NP_001330543.1 NP_199395.2

Orthologous

[Ortholog page] AT4G18660 (ath) AT4G18680 (ath) AT4G18690 (ath) LOC100854046 (vvi) LOC101250865 (sly) LOC103827768 (bra) LOC103834076 (bra) LOC103839638 (bra) LOC103856711 (bra) LOC103856734 (bra) LOC103861007 (bra) LOC104645855 (sly) LOC104646037 (sly) LOC104646038 (sly) LOC109119578 (sly) LOC111043195 (zma)

Subcellular
localization
wolf

cyto 5, plas 1, nucl 1, golg_plas 1, mito 1, pero 1, cysk_nucl 1	(predict for NP_001318745.1)
cyto 8, chlo 1, mito 1, pero 1, chlo_mito 1	(predict for NP_001330540.1)
cyto 4, nucl 4, nucl_plas 3, cysk 1	(predict for NP_001330541.1)
cyto 4, nucl 4, nucl_plas 3, cysk 1	(predict for NP_001330542.1)
cyto 8, chlo 1, mito 1, pero 1, chlo_mito 1	(predict for NP_001330543.1)
cyto 4, nucl 4, nucl_plas 2, cysk 1	(predict for NP_199395.2)

Subcellular
localization
TargetP

other 8	(predict for NP_001318745.1)
other 8	(predict for NP_001330540.1)
other 8	(predict for NP_001330541.1)
other 8	(predict for NP_001330542.1)
other 8	(predict for NP_001330543.1)
other 8	(predict for NP_199395.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	3

Genes directly connected with DOG1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.2	CIPK20	CBL-interacting protein kinase 20	[detail]	834622
3.9	PRR7	pseudo-response regulator 7	[detail]	831793
3.7	MRE11	DNA repair and meiosis protein (Mre11)	[detail]	835514

Coexpressed
gene list

[Coexpressed gene list for DOG1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248911_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248911_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248911_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834623
Refseq ID (protein)	NP_001318745.1
	NP_001330540.1
	NP_001330541.1
	NP_001330542.1
	NP_001330543.1
	NP_199395.2

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