[←][→] ath   AT5G46100 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_199422.1 
BLAST NP_199422.1 
Orthologous [Ortholog page] LOC100249913 (vvi)  LOC100275629 (zma)  LOC100794116 (gma)  LOC101248843 (sly)  LOC103827756 (bra)  LOC103853847 (bra)  LOC107277503 (osa)  LOC112419498 (mtr) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  cyto 1,  cyto_mito 1,  nucl 1,  mito 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_199422.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199422.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G46100 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838511
9.4 AT1G06710 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837181
9.2 AT3G26540 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 822262
9.0 AT1G13040 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 837861
6.9 AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 828915
6.3 RUS1 root UVB sensitive-like protein (Protein of unknown function, DUF647) [detail] 823732
6.0 RPF1 RNA processing FACTOR [detail] 837825
3.8 AT5G46090 transmembrane protein, putative (DUF679) [detail] 834650
Coexpressed
gene list		 [Coexpressed gene list for AT5G46100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248935_at
248935_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248935_at
248935_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248935_at
248935_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834651      
Refseq ID (protein) NP_199422.1 


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