[←][→] ath   AT5G46250 Gene
functional annotation
Function   RNA-binding protein  
GO BP
GO:0006396 [list] [network] RNA processing  (831 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_001078721.1  NP_568660.3  NP_851141.1 
BLAST NP_001078721.1  NP_568660.3  NP_851141.1 
Orthologous [Ortholog page] LOC4325141 (osa)  LOC7483585 (ppo)  LOC11441312 (mtr)  LOC100216671 (zma)  LOC100250312 (vvi)  LOC100788145 (gma)  LOC100807619 (gma)  LOC101245912 (sly)  LOC103827742 (bra)  LOC103839619 (bra) 
Subcellular
localization
wolf
cyto 7,  pero 1,  nucl 1,  extr 1  (predict for NP_001078721.1)
cyto 7,  pero 1,  nucl 1,  extr 1  (predict for NP_568660.3)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_851141.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_001078721.1)
other 6,  chlo 3  (predict for NP_568660.3)
other 6,  chlo 3  (predict for NP_851141.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LARP6a on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 CXIP4 CAX interacting protein 4 [detail] 817440
8.1 VTI1B Vesicle transport v-SNARE family protein [detail] 839208
7.9 AT3G60300 RWD domain-containing protein [detail] 825201
7.8 LARP6b RNA-binding protein [detail] 819002
Coexpressed
gene list		 [Coexpressed gene list for LARP6a]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248905_at
248905_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248905_at
248905_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248905_at
248905_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834667      
Refseq ID (protein) NP_001078721.1 
NP_568660.3 
NP_851141.1 


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