ATTED-II : GeneID search result

[←][→] ath AT5G46390 Gene

functional annotation

Function

Peptidase S41 family protein

GO BP

GO CC

GO:0009543 [list] [network] chloroplast thylakoid lumen	(59 genes)	IDA
GO:0031977 [list] [network] thylakoid lumen	(72 genes)	IDA
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM

GO MF

GO:0004175 [list] [network] endopeptidase activity

(308 genes)

IBA

KEGG

Protein

NP_199451.2 NP_974893.1

BLAST

NP_199451.2 NP_974893.1

Orthologous

[Ortholog page] LOC4327866 (osa) LOC7483592 (ppo) LOC11411398 (mtr) LOC100250320 (vvi) LOC100804192 (gma) LOC101255755 (sly) LOC103636140 (zma) LOC103839604 (bra)

Subcellular
localization
wolf

chlo 4, golg 2, chlo_mito 2, plas 1	(predict for NP_199451.2)
chlo 6, chlo_mito 4, mito 1, cyto 1, plas 1, extr 1, cyto_plas 1	(predict for NP_974893.1)

Subcellular
localization
TargetP

chlo 5	(predict for NP_199451.2)
chlo 5	(predict for NP_974893.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G46390 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.7	AT3G07670	Rubisco methyltransferase family protein	[detail]	819958
6.1	AT3G10970	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[detail]	820268
6.1	F2KP	fructose-2,6-bisphosphatase	[detail]	837221
3.1	AT4G12917		[detail]	5008136

Coexpressed
gene list

[Coexpressed gene list for AT5G46390]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248899_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248899_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248899_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834682
Refseq ID (protein)	NP_199451.2
Refseq ID (protein)	NP_974893.1

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