ATTED-II : GeneID search result

[←][→] ath AT5G46500 Gene

functional annotation

Function

protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein

GO BP

GO CC

GO MF

KEGG

Protein

NP_001318749.1 NP_001330777.1 NP_001330778.1 NP_001330779.1

BLAST

NP_001318749.1 NP_001330777.1 NP_001330778.1 NP_001330779.1

Orthologous

Subcellular
localization
wolf

nucl 4, mito 3, cyto_nucl 3	(predict for NP_001318749.1)
nucl 4, mito 3, cyto_nucl 3	(predict for NP_001330777.1)
nucl 4, mito 3, cyto_nucl 3	(predict for NP_001330778.1)
nucl 4, mito 3, cyto_nucl 3	(predict for NP_001330779.1)

Subcellular
localization
TargetP

mito 3	(predict for NP_001318749.1)
mito 3	(predict for NP_001330777.1)
mito 3	(predict for NP_001330778.1)
mito 3	(predict for NP_001330779.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G46500 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.6	AT1G31540	Disease resistance protein (TIR-NBS-LRR class) family	[detail]	840044
9.5	AT5G46490	Disease resistance protein (TIR-NBS-LRR class) family	[detail]	834692
6.1	AT5G46260	disease resistance protein (TIR-NBS-LRR class) family	[detail]	834668
4.7	AT5G46510	Disease resistance protein (TIR-NBS-LRR class) family	[detail]	834694
3.7	DAR5	DA1-related protein 5	[detail]	836795

Coexpressed
gene list

[Coexpressed gene list for AT5G46500]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248846_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248846_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248846_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834693
Refseq ID (protein)	NP_001318749.1
	NP_001330777.1
	NP_001330778.1
	NP_001330779.1

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