[←][→] ath   AT5G46920 Gene
functional annotation
Function   Intron maturase, type II family protein  
GO BP
GO:0006314 [list] [network] intron homing  (3 genes)  IEA  
GO:0090615 [list] [network] mitochondrial mRNA processing  (7 genes)  IMP  
GO:0000373 [list] [network] Group II intron splicing  (24 genes)  IMP  
GO:0007005 [list] [network] mitochondrion organization  (158 genes)  IMP  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004519 [list] [network] endonuclease activity  (145 genes)  IEA  
KEGG
Protein NP_199503.1 
BLAST NP_199503.1 
Orthologous [Ortholog page] LOC4349434 (osa)  LOC25480493 (mtr)  LOC25485884 (mtr)  LOC100191501 (zma)  LOC100259239 (vvi)  LOC100789815 (gma)  LOC100790995 (gma)  LOC101258685 (sly)  LOC103827684 (bra)  LOC109942742 (zma) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_199503.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_199503.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G46920 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.6 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817681
10.3 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824663
9.7 RPD1 Ubiquitin carboxyl-terminal hydrolase family protein [detail] 829487
9.4 AT3G06920 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819877
8.7 AT4G21170 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 827865
8.3 TRZ3 tRNAse Z3 [detail] 841647
6.5 AT3G04130 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819568
6.4 AT2G02880 mucin-like protein [detail] 814819
5.9 AT2G19120 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 816429
5.6 AT1G53460 craniofacial development protein [detail] 841781
4.6 AT2G17830 F-box and associated interaction domains-containing protein [detail] 816292
4.5 AT5G08780 winged-helix DNA-binding transcription factor family protein [detail] 830778
Coexpressed
gene list		 [Coexpressed gene list for AT5G46920]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248815_at
248815_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248815_at
248815_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248815_at
248815_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834738      
Refseq ID (protein) NP_199503.1 


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