[←][→] ath   AT5G47690 Gene
functional annotation
Function   binding protein  
GO BP
GO:0007064 [list] [network] mitotic sister chromatid cohesion  (8 genes)  IEA  
GO:0009556 [list] [network] microsporogenesis  (24 genes)  IGI  
GO:0006281 [list] [network] DNA repair  (295 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001119389.1  NP_001119390.1  NP_001331466.1  NP_199580.3 
BLAST NP_001119389.1  NP_001119390.1  NP_001331466.1  NP_199580.3 
Orthologous [Ortholog page] LOC7463647 (ppo)  LOC9268318 (osa)  LOC11408726 (mtr)  LOC25494325 (mtr)  LOC100775397 (gma)  LOC100797685 (gma)  LOC100797921 (gma)  LOC100816692 (gma)  LOC100853350 (vvi)  LOC100854206 (vvi)  LOC100855126 (vvi)  LOC101266989 (sly)  LOC103631385 (zma)  LOC103638287 (zma)  LOC103827626 (bra)  LOC103853833 (bra)  LOC109121389 (vvi) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  E.R. 1,  cyto_plas 1  (predict for NP_001119389.1)
nucl 6,  cyto 2,  E.R. 1,  cyto_plas 1  (predict for NP_001119390.1)
plas 4,  chlo 3,  nucl_plas 3  (predict for NP_001331466.1)
nucl 6,  cyto 2,  E.R. 1  (predict for NP_199580.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001119389.1)
other 8  (predict for NP_001119390.1)
scret 4,  other 3  (predict for NP_001331466.1)
other 8  (predict for NP_199580.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03420 Nucleotide excision repair 2
ath04120 Ubiquitin mediated proteolysis 2
ath03013 RNA transport 2
Genes directly connected with AT5G47690 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.3 PKL chromatin remodeling factor CHD3 (PICKLE) [detail] 817055
11.7 UBP13 ubiquitin-specific protease 13 [detail] 820364
11.4 GTB1 global transcription factor group B1 [detail] 842855
11.4 HAF01 HAC13 protein (HAC13) [detail] 840169
10.8 THO2 THO2 [detail] 839081
10.6 TTN7 Structural maintenance of chromosomes (SMC) family protein [detail] 817259
10.6 TTN8 Structural maintenance of chromosomes (SMC) family protein [detail] 824632
10.2 SNL1 SIN3-like 1 [detail] 821265
10.1 XI-I myosin [detail] 829456
9.9 SYN4 sister chromatid cohesion 1 protein 4 [detail] 831487
9.6 TNO1 TGN-related, localized SYP41 interacting protein [detail] 839062
8.6 TADA tRNA arginine adenosine deaminase [detail] 843202
8.5 SNL2 SIN3-like 2 [detail] 831354
7.9 DDB1A damaged DNA binding protein 1A [detail] 825890
7.8 CUL4 cullin4 [detail] 834663
7.8 AT1G73460 Protein kinase superfamily protein [detail] 843681
7.7 EMB1135 RING/FYVE/PHD zinc finger superfamily protein [detail] 844273
7.0 EMF1 embryonic flower 1 (EMF1) [detail] 831025
6.9 ALATS Alanyl-tRNA synthetase [detail] 841442
Coexpressed
gene list		 [Coexpressed gene list for AT5G47690]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248755_at
248755_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248755_at
248755_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248755_at
248755_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834820      
Refseq ID (protein) NP_001119389.1 
NP_001119390.1 
NP_001331466.1 
NP_199580.3 


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