ATTED-II : GeneID search result

[←][→] ath AT5G48050 Gene

functional annotation

Function

Copia-like polyprotein/retrotransposon

GO BP

GO CC

GO MF

KEGG

Protein

NP_199616.1

BLAST

NP_199616.1

Orthologous

[Ortholog page] AT1G34070 (ath) LOC4329414 (osa) LOC25483236 (mtr) LOC100193922 (zma) LOC100284580 (zma) LOC100777165 (gma) LOC100780242 (gma) LOC100783083 (gma) LOC100785648 (gma) LOC100787253 (gma) LOC100796052 (gma) LOC100803836 (gma) LOC100805339 (gma) LOC100811874 (gma) LOC100814678 (gma) LOC100815715 (gma) LOC100818082 (gma) LOC101247794 (sly) LOC101259116 (sly) LOC101267942 (sly) LOC102659812 (gma) LOC102660434 (gma) LOC102662166 (gma) LOC102662451 (gma) LOC102662759 (gma) LOC102663726 (gma) LOC102664852 (gma) LOC102665091 (gma) LOC102666547 (gma) LOC102666748 (gma) LOC102667259 (gma) LOC102669634 (gma) LOC102669767 (gma) LOC103627296 (zma) LOC103627744 (zma) LOC103628003 (zma) LOC103628333 (zma) LOC103628444 (zma) LOC103630928 (zma) LOC103631110 (zma) LOC103632525 (zma) LOC103636105 (zma) LOC103636257 (zma) LOC103637189 (zma) LOC103637765 (zma) LOC103639348 (zma) LOC103639726 (zma) LOC103642746 (zma) LOC103642825 (zma) LOC103645352 (zma) LOC103645539 (zma) LOC103645735 (zma) LOC103648473 (zma) LOC103649168 (zma) LOC103649506 (zma) LOC103652023 (zma) LOC103652131 (zma) LOC103652365 (zma) LOC103652409 (zma) LOC103655223 (zma) LOC103655735 (zma) LOC103828277 (bra) LOC103832736 (bra) LOC103849267 (bra) LOC103861737 (bra) LOC104646075 (sly) LOC106795331 (gma) LOC107275530 (osa) LOC107278842 (osa) LOC107279073 (osa) LOC107279384 (osa) LOC107279616 (osa) LOC107279658 (osa) LOC107281306 (osa) LOC107281308 (osa) LOC107281799 (osa) LOC108869317 (bra) LOC108869321 (bra) LOC108871624 (bra) LOC108871843 (bra) LOC109941408 (zma) LOC109941821 (zma) LOC109942671 (zma) LOC109945307 (zma) LOC109945826 (zma) LOC109945979 (zma) LOC109946033 (zma) LOC111591366 (zma) LOC112417205 (mtr) LOC112418188 (mtr) LOC112418189 (mtr) LOC112418218 (mtr) LOC112418458 (mtr) LOC112418583 (mtr) LOC112418658 (mtr) LOC112418687 (mtr) LOC112420839 (mtr) LOC112421315 (mtr) LOC112422138 (mtr) LOC112422778 (mtr) LOC112422831 (mtr) LOC112936213 (osa) LOC112939674 (osa) LOC112939900 (osa) LOC113001697 (gma)

Subcellular
localization
wolf

nucl 6, cyto 1, extr 1, pero 1, cysk 1, cyto_E.R. 1, cyto_plas 1

(predict for NP_199616.1)

Subcellular
localization
TargetP

other 7, scret 4

(predict for NP_199616.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT5G48050]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248730_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248730_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248730_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834857
Refseq ID (protein)	NP_199616.1

The preparation time of this page was 0.1 [sec].