[←][→] ath   AT5G48240 Gene
functional annotation
Function   Rrp15p protein  
GO BP
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001119396.1  NP_001154769.1  NP_199635.2 
BLAST NP_001119396.1  NP_001154769.1  NP_199635.2 
Orthologous [Ortholog page] LOC4350250 (osa)  LOC7456019 (ppo)  LOC100249313 (vvi)  LOC100280074 (zma)  LOC100780091 (gma)  LOC100817676 (gma)  LOC101255093 (sly)  LOC103649151 (zma)  LOC103837243 (bra)  LOC103874938 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for NP_001119396.1)
nucl 9  (predict for NP_001154769.1)
nucl 9  (predict for NP_199635.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_001119396.1)
other 7,  chlo 4  (predict for NP_001154769.1)
other 7,  chlo 4  (predict for NP_199635.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
Genes directly connected with AT5G48240 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.3 AT1G15420 WD repeat protein [detail] 838113
11.1 AT3G01160 pre-rRNA-processing ESF1-like protein [detail] 820504
10.9 AT3G23620 Ribosomal RNA processing Brix domain protein [detail] 821942
10.3 EDA14 embryo sac development arrest 14 [detail] 825207
6.8 NAP1;3 nucleosome assembly protein 1;3 [detail] 835797
6.8 AT5G51130 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835187
Coexpressed
gene list		 [Coexpressed gene list for AT5G48240]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248743_at
248743_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248743_at
248743_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248743_at
248743_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834877      
Refseq ID (protein) NP_001119396.1 
NP_001154769.1 
NP_199635.2 


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