[←][→] ath   AT5G48500 Gene
functional annotation
Function   pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein  
GO BP
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO CC
GO MF
KEGG
Protein NP_568700.1 
BLAST NP_568700.1 
Orthologous [Ortholog page] AT2G10930 (ath)  AT5G18310 (ath)  LOC4324341 (osa)  LOC7453593 (ppo)  LOC7471184 (ppo)  LOC11434486 (mtr)  LOC11435138 (mtr)  LOC11435618 (mtr)  LOC100191186 (zma)  LOC100262060 (vvi)  LOC100279124 (zma)  LOC100306260 (gma)  LOC100382309 (zma)  LOC100777580 (gma)  LOC100797475 (gma)  LOC100805002 (gma)  LOC100805064 (gma)  LOC100805674 (gma)  LOC100808210 (gma)  LOC100815552 (gma)  LOC100854001 (vvi)  LOC101243779 (sly)  LOC101256601 (sly)  LOC103837257 (bra)  LOC103845844 (bra)  LOC103854542 (bra)  LOC103874961 (bra)  LOC107277446 (osa) 
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1  (predict for NP_568700.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568700.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with AT5G48500 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.7 AT2G22420 Peroxidase superfamily protein [detail] 816773
4.7 AT5G57130 Clp amino terminal domain-containing protein [detail] 835819
4.7 MP Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein [detail] 838573
Coexpressed
gene list		 [Coexpressed gene list for AT5G48500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248685_at
248685_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248685_at
248685_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248685_at
248685_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834906      
Refseq ID (protein) NP_568700.1 


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