ATTED-II : GeneID search result

[←][→] ath AT5G49960 Gene

functional annotation

Function

ion channel protein

GO BP

GO:0006811 [list] [network] ion transport

(699 genes)

IEA

GO CC

GO:0031965 [list] [network] nuclear membrane	(42 genes)	IEA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

KEGG

Protein

NP_001331311.1 NP_001331312.1 NP_199807.1

BLAST

NP_001331311.1 NP_001331312.1 NP_199807.1

Orthologous

[Ortholog page] LOC732613 (gma) LOC732614 (gma) LOC732770 (zma) LOC732836 (zma) LOC4324936 (osa) LOC4334751 (osa) LOC7498107 (ppo) LOC11433851 (mtr) LOC25499758 (mtr) LOC100250955 (vvi) LOC100254139 (vvi) LOC100802316 (gma) LOC101257908 (sly) LOC101262999 (sly) LOC103852199 (bra)

Subcellular
localization
wolf

chlo 4, chlo_mito 4, mito 3, plas 1	(predict for NP_001331311.1)
chlo 5, chlo_mito 4, mito 2, plas 1	(predict for NP_001331312.1)
chlo 4, plas 4, chlo_mito 3, mito 1	(predict for NP_199807.1)

Subcellular
localization
TargetP

mito 8	(predict for NP_001331311.1)
mito 8	(predict for NP_001331312.1)
mito 8	(predict for NP_199807.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G49960 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.6	QUL1	QUASIMODO2 LIKE 1	[detail]	837945
5.2	SCPL27	serine carboxypeptidase-like 27	[detail]	819990
4.5	ORP1D	OSBP(oxysterol binding protein)-related protein 1D	[detail]	837875

Coexpressed
gene list

[Coexpressed gene list for AT5G49960]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248584_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248584_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248584_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835060
Refseq ID (protein)	NP_001331311.1
	NP_001331312.1
	NP_199807.1

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