[←][→] ath   AT5G49980 Gene
functional annotation
Function   auxin F-box protein 5  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG
Protein NP_568718.1 
BLAST NP_568718.1 
Orthologous [Ortholog page] AFB4 (ath)  LOC4330795 (osa)  LOC4350479 (osa)  LOC7467186 (ppo)  LOC7486562 (ppo)  LOC11433686 (mtr)  LOC11435177 (mtr)  LOC100245501 (vvi)  LOC100279510 (zma)  LOC100316900 (sly)  LOC100381660 (zma)  LOC100775877 (gma)  LOC100776213 (gma)  LOC100799915 (gma)  LOC100807836 (gma)  LOC103858427 (bra)  LOC103862050 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 3,  chlo 3,  plas 1,  golg 1,  golg_plas 1  (predict for NP_568718.1)
Subcellular
localization
TargetP
other 8  (predict for NP_568718.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
Genes directly connected with AFB5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 TIR1 F-box/RNI-like superfamily protein [detail] 825473
6.6 AT2G45810 DEA(D/H)-box RNA helicase family protein [detail] 819189
5.8 AT1G27190 Leucine-rich repeat protein kinase family protein [detail] 839608
5.4 D6PK D6 protein kinase [detail] 835689
4.8 YSL5 YELLOW STRIPE like 5 [detail] 821032
Coexpressed
gene list		 [Coexpressed gene list for AFB5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248557_at
248557_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248557_at
248557_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248557_at
248557_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835062      
Refseq ID (protein) NP_568718.1 


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