[←][→] ath   AT5G51880 Gene
functional annotation
Function   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein  
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (12 genes)  IBA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (12 genes)  IBA  
GO:0031418 [list] [network] L-ascorbic acid binding  (23 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (281 genes)  IEA  
KEGG
Protein NP_568767.2 
BLAST NP_568767.2 
Orthologous [Ortholog page] LOC4331420 (osa)  LOC7454465 (ppo)  LOC11422845 (mtr)  LOC100262964 (vvi)  LOC100526938 (gma)  LOC100779924 (gma)  LOC101266392 (sly)  LOC103630932 (zma)  LOC103832702 (bra) 
Subcellular
localization
wolf
chlo 6,  cyto 1,  vacu 1,  E.R._vacu 1,  mito 1,  extr 1,  cyto_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_568767.2)
Subcellular
localization
TargetP
other 7  (predict for NP_568767.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03018 RNA degradation 4
ath03050 Proteasome 3
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT5G51880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 UBC27 ubiquitin-conjugating enzyme 27 [detail] 835159
6.8 FYPP1 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 841459
6.2 LSM2 Small nuclear ribonucleoprotein family protein [detail] 839526
5.8 AT1G03150 Acyl-CoA N-acyltransferases (NAT) superfamily protein [detail] 839562
5.6 UBC7 ubiquitin-conjugating enzyme E2 [detail] 836048
5.4 CKB2 casein kinase II beta chain 2 [detail] 827484
Coexpressed
gene list		 [Coexpressed gene list for AT5G51880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248376_at
248376_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248376_at
248376_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248376_at
248376_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835263      
Refseq ID (protein) NP_568767.2 


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