[←][→] ath   AT5G52660 Gene
functional annotation
Function   Homeodomain-like superfamily protein  
GO BP
GO:0042752 [list] [network] regulation of circadian rhythm  (57 genes)  IGI  
GO:0009739 [list] [network] response to gibberellin  (154 genes)  IEP  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0009753 [list] [network] response to jasmonic acid  (222 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (297 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG
Protein NP_568776.2  NP_851177.1 
BLAST NP_568776.2  NP_851177.1 
Orthologous [Ortholog page] MYB136 (gma)  LOC778090 (gma)  MYB133 (gma)  LOC778166 (gma)  AT4G01280 (ath)  ASG4 (ath)  LOC4339863 (osa)  LOC4341799 (osa)  LOC7457357 (ppo)  LOC7496991 (ppo)  LOC9272080 (osa)  LOC25480372 (mtr)  LOC25500834 (mtr)  LOC100252586 (vvi)  LOC100274468 (zma)  LOC100280329 (zma)  LOC100283068 (zma)  LOC100783949 (gma)  LOC100791774 (gma)  LOC100794389 (gma)  LOC100855334 (vvi)  ARS1 (sly)  LOC101259846 (sly)  LOC103836888 (bra)  LOC103844654 (bra)  LOC103844751 (bra)  LOC103857116 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_568776.2)
nucl 10  (predict for NP_851177.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for NP_568776.2)
chlo 6,  other 3  (predict for NP_851177.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with AT5G52660 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 ACHT4 atypical CYS HIS rich thioredoxin 4 [detail] 837379
6.5 AT4G01280 Homeodomain-like superfamily protein [detail] 827903
6.1 AT4G12000 SNARE associated Golgi protein family [detail] 826807
5.3 NF-YA1 nuclear factor Y, subunit A1 [detail] 831124
4.6 AT3G03440 ARM repeat superfamily protein [detail] 821253
4.6 AT5G10410 ENTH/ANTH/VHS superfamily protein [detail] 830905
Coexpressed
gene list		 [Coexpressed gene list for AT5G52660]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248328_at
248328_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248328_at
248328_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248328_at
248328_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835343      
Refseq ID (protein) NP_568776.2 
NP_851177.1 


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