[][] ath   At5g52850 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_200097.1 
BLAST NP_200097.1 
Orthologous [Ortholog page] LOC4334879 (osa)LOC7468352 (ppo)LOC11414844 (mtr)LOC100791770 (gma)LOC103844759 (bra)LOC123114518 (tae)LOC123124014 (tae)LOC123397470 (hvu)
Subcellular
localization
wolf
chlo 9  (predict for NP_200097.1)
Subcellular
localization
TargetP
chlo 5,  scret 4  (predict for NP_200097.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G52850 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
15.3 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein [detail] 842125
14.9 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 830107
13.9 AT4G35130 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829665
13.7 AT3G58590 Pentatricopeptide repeat (PPR) superfamily protein [detail] 825028
13.4 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833931
13.0 AT1G13410 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837901
12.9 AT4G02750 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 828187
12.5 AT1G09220 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837442
12.4 AT3G13880 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 820601
12.2 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820319
12.0 OTP81 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817526
11.9 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein [detail] 836419
11.9 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838612
11.6 AT3G58520 Ubiquitin carboxyl-terminal hydrolase family protein [detail] 825021
11.3 AT4G33170 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829454
11.3 MEF18 mitochondrial editing factor 18 [detail] 832021
11.2 DOT4 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827609
11.1 AT3G50420 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824206
11.1 AT4G16835 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 827390
10.8 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 821914
10.2 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein [detail] 822194
9.8 RARE1 Pentatricopeptide repeat (PPR) superfamily protein [detail] 831168
9.6 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824133
8.8 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein [detail] 826999
8.7 MEF20 mitochondrial editing factor 20 [detail] 821430
8.6 AT5G28370 Pentatricopeptide repeat (PPR) superfamily protein [detail] 832922
8.3 AT5G04780 Pentatricopeptide repeat (PPR) superfamily protein [detail] 830356
7.0 AT1G61400 S-locus lectin protein kinase family protein [detail] 842434
6.9 APPR6 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 844072
6.6 AT5G47510 Sec14p-like phosphatidylinositol transfer family protein [detail] 834801
5.8 AT5G45780 Leucine-rich repeat protein kinase family protein [detail] 834618
Coexpressed
gene list
[Coexpressed gene list for AT5G52850]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248307_at
248307_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248307_at
248307_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
248307_at
248307_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 835362    
Refseq ID (protein) NP_200097.1 


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