ATTED-II : GeneID search result

[←][→] ath AT5G53020 Gene

functional annotation

Function

Ribonuclease P protein subunit P38-like protein

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(14855 genes)

ISM

GO MF

KEGG

Protein

NP_001318792.1 NP_001330311.1 NP_001330312.1 NP_001330313.1 NP_001330314.1 NP_001330315.1 NP_001330316.1 NP_001330317.1 NP_001330318.1 NP_200114.3

BLAST

NP_001318792.1 NP_001330311.1 NP_001330312.1 NP_001330313.1 NP_001330314.1 NP_001330315.1 NP_001330316.1 NP_001330317.1 NP_001330318.1 NP_200114.3

Orthologous

[Ortholog page] LOC9266554 (osa) LOC11440435 (mtr) LOC100255603 (vvi) LOC100807704 (gma) LOC100815082 (gma) LOC101259818 (sly) LOC103651620 (zma) LOC103844780 (bra)

Subcellular
localization
wolf

cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001318792.1)
nucl 7, chlo 2	(predict for NP_001330311.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001330312.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001330313.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001330314.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001330315.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001330316.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001330317.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001330318.1)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_200114.3)

Subcellular
localization
TargetP

other 8	(predict for NP_001318792.1)
other 6, mito 3	(predict for NP_001330311.1)
other 8	(predict for NP_001330312.1)
other 8	(predict for NP_001330313.1)
other 8	(predict for NP_001330314.1)
other 8	(predict for NP_001330315.1)
other 8	(predict for NP_001330316.1)
other 8	(predict for NP_001330317.1)
other 8	(predict for NP_001330318.1)
other 8	(predict for NP_200114.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G53020 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.4	AT5G53010	calcium-transporting ATPase	[detail]	835380
6.3	AT3G05270	filament-like protein (DUF869)	[detail]	819691
5.4	AT5G52280	Myosin heavy chain-related protein	[detail]	835304

Coexpressed
gene list

[Coexpressed gene list for AT5G53020]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248291_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248291_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248291_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835381
Refseq ID (protein)	NP_001318792.1
	NP_001330311.1
	NP_001330312.1
	NP_001330313.1
	NP_001330314.1
	NP_001330315.1
	NP_001330316.1
	NP_001330317.1
	NP_001330318.1
	NP_200114.3

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