ATTED-II : GeneID search result

[←][→] ath AT5G53430 Gene

functional annotation

Function

SET domain group 29

GO BP

GO:0051571 [list] [network] positive regulation of histone H3-K4 methylation	(5 genes)	IGI
GO:0009294 [list] [network] DNA mediated transformation	(26 genes)	IMP

GO CC

GO:0009506 [list] [network] plasmodesma	(962 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	IEA ISM

GO MF

GO:0018024 [list] [network] histone-lysine N-methyltransferase activity	(39 genes)	IEA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_200155.2

BLAST

NP_200155.2

Orthologous

[Ortholog page] SDG14 (ath) SDG16 (ath) LOC4324177 (osa) LOC4324588 (osa) LOC11434637 (mtr) LOC11446453 (mtr) LOC25499728 (mtr) LOC25500701 (mtr) LOC100246631 (vvi) LOC100246975 (vvi) LOC100383419 (zma) LOC100775276 (gma) LOC100785063 (gma) LOC100793624 (gma) LOC100797346 (gma) LOC100808761 (gma) LOC100811337 (gma) LOC100811960 (gma) LOC101248623 (sly) LOC101251759 (sly) LOC103649567 (zma) LOC103830321 (bra) LOC103834358 (bra) LOC103844819 (bra)

Subcellular
localization
wolf

nucl 5, mito 3, cyto_nucl 3

(predict for NP_200155.2)

Subcellular
localization
TargetP

other 9

(predict for NP_200155.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SDG29 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.7	SNL1	SIN3-like 1	[detail]	821265
5.5	SDG2	SET domain protein 2	[detail]	827183
5.5	AT2G03140	alpha/beta-Hydrolases superfamily protein	[detail]	814843

Coexpressed
gene list

[Coexpressed gene list for SDG29]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248265_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248265_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248265_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835424
Refseq ID (protein)	NP_200155.2

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