[←][→] ath   AT5G53480 Gene
functional annotation
Function   ARM repeat superfamily protein  
GO BP
GO:0006606 [list] [network] protein import into nucleus  (47 genes)  IBA IDA  
GO:0015031 [list] [network] protein transport  (724 genes)  IDA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA IDA ISM  
GO MF
GO:0008536 [list] [network] Ran GTPase binding  (14 genes)  IEA  
GO:0061608 [list] [network] nuclear import signal receptor activity  (15 genes)  IBA  
GO:0008139 [list] [network] nuclear localization sequence binding  (20 genes)  IBA  
GO:0140142 [list] [network] nucleocytoplasmic carrier activity  (21 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_200160.1 
BLAST NP_200160.1 
Orthologous [Ortholog page] LOC4352566 (osa)  LOC7464283 (ppo)  LOC25491131 (mtr)  LOC25491133 (mtr)  LOC25502229 (mtr)  LOC100265913 (vvi)  LOC100381984 (zma)  LOC100383778 (zma)  LOC100785130 (gma)  LOC100805445 (gma)  LOC100818831 (gma)  LOC101245551 (sly)  LOC101263498 (sly)  LOC103844822 (bra) 
Subcellular
localization
wolf
chlo 5,  cyto 4,  nucl 1,  vacu 1  (predict for NP_200160.1)
Subcellular
localization
TargetP
other 8  (predict for NP_200160.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
Genes directly connected with AT5G53480 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 IMPA-2 importin alpha [detail] 827302
8.0 BSL3 BRI1 suppressor 1 (BSU1)-like 3 [detail] 817263
8.0 ERMO2 Sec23/Sec24 protein transport family protein [detail] 819896
8.0 TRN1 transportin 1 [detail] 816198
7.2 BSL2 BRI1 suppressor 1 (BSU1)-like 2 [detail] 837362
7.0 ATB BETA Protein phosphatase 2A, regulatory subunit PR55 [detail] 838348
7.0 ETO1 tetratricopeptide repeat (TPR)-containing protein [detail] 824340
6.8 EBF1 EIN3-binding F box protein 1 [detail] 817087
Coexpressed
gene list		 [Coexpressed gene list for AT5G53480]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248272_at
248272_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248272_at
248272_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248272_at
248272_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835429      
Refseq ID (protein) NP_200160.1 


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