[←][→] ath   AT5G53500 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0017137 [list] [network] Rab GTPase binding  (35 genes)  IBA  
KEGG
Protein NP_001330833.1  NP_200162.1 
BLAST NP_001330833.1  NP_200162.1 
Orthologous [Ortholog page] AT5G24320 (ath)  LOC4331395 (osa)  LOC4336699 (osa)  LOC7464287 (ppo)  LOC7467055 (ppo)  LOC7475169 (ppo)  LOC7497266 (ppo)  LOC11429597 (mtr)  LOC25491138 (mtr)  LOC25502243 (mtr)  LOC100241604 (vvi)  LOC100245187 (vvi)  LOC100249640 (vvi)  LOC100281552 (zma)  LOC100788374 (gma)  LOC100803309 (gma)  LOC100807177 (gma)  LOC100817209 (gma)  LOC101244103 (sly)  LOC101260733 (sly)  LOC101262736 (sly)  LOC101265109 (sly)  LOC103646067 (zma)  LOC103844825 (bra)  LOC103852028 (bra)  LOC103857078 (bra)  LOC103874301 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001330833.1)
nucl 9,  cyto 1  (predict for NP_200162.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001330833.1)
other 8  (predict for NP_200162.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G53500 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 AT4G32790 Exostosin family protein [detail] 829415
5.1 KCS9 3-ketoacyl-CoA synthase 9 [detail] 816124
4.9 FEI1 Leucine-rich repeat protein kinase family protein [detail] 840032
Coexpressed
gene list		 [Coexpressed gene list for AT5G53500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248273_at
248273_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248273_at
248273_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248273_at
248273_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835432      
Refseq ID (protein) NP_001330833.1 
NP_200162.1 


The preparation time of this page was 0.1 [sec].