[←][→] ath   AT5G54310 Gene
functional annotation
Function   ARF-GAP domain 5  
GO BP
GO:0060858 [list] [network] vesicle-mediated transport involved in floral organ abscission  (1 genes)  IMP  
GO:0060866 [list] [network] leaf abscission  (8 genes)  IMP  
GO:0030308 [list] [network] negative regulation of cell growth  (13 genes)  IMP  
GO:0090630 [list] [network] activation of GTPase activity  (13 genes)  IDA  
GO:0050829 [list] [network] defense response to Gram-negative bacterium  (20 genes)  IMP  
GO:0010227 [list] [network] floral organ abscission  (26 genes)  IMP  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_568807.1 
BLAST NP_568807.1 
Orthologous [Ortholog page] LOC4343612 (osa)  LOC11407804 (mtr)  LOC25502554 (mtr)  LOC100193084 (zma)  LOC100262374 (vvi)  LOC100279757 (zma)  LOC100780452 (gma)  LOC100783121 (gma)  LOC100789910 (gma)  LOC100807561 (gma)  LOC100815076 (gma)  LOC100854573 (vvi)  LOC101244017 (sly)  LOC101245592 (sly)  LOC103844889 (bra)  LOC103851972 (bra)  LOC103857044 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_568807.1)
Subcellular
localization
TargetP
other 8  (predict for NP_568807.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
Genes directly connected with AGD5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 AT4G32760 ENTH/VHS/GAT family protein [detail] 829412
7.1 AT1G15130 Endosomal targeting BRO1-like domain-containing protein [detail] 838077
6.8 AT5G32440 Ubiquitin system component Cue protein [detail] 833203
6.0 FYD FYD [detail] 820437
5.3 AT5G16220 Octicosapeptide/Phox/Bem1p family protein [detail] 831481
Coexpressed
gene list		 [Coexpressed gene list for AGD5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248180_at
248180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248180_at
248180_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248180_at
248180_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835519      
Refseq ID (protein) NP_568807.1 


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