[←][→] ath   AT5G55400 Gene
functional annotation
Function   Actin binding Calponin homology (CH) domain-containing protein  
GO BP
GO:0051639 [list] [network] actin filament network formation  (5 genes)  IBA IDA  
GO:0051017 [list] [network] actin filament bundle assembly  (20 genes)  IBA IDA  
GO CC
GO:0032432 [list] [network] actin filament bundle  (4 genes)  IBA  
GO:0005884 [list] [network] actin filament  (12 genes)  IBA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0051015 [list] [network] actin filament binding  (47 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001318801.1  NP_001332484.1  NP_001332485.1 
BLAST NP_001318801.1  NP_001332484.1  NP_001332485.1 
Orthologous [Ortholog page] AT2G04750 (ath)  FIM1 (ath)  FIM5 (ath)  LOC4329816 (osa)  LOC4330541 (osa)  LOC7455983 (ppo)  LOC11425294 (mtr)  LOC11437090 (mtr)  LOC100248725 (vvi)  LOC100255102 (vvi)  LOC100281499 (zma)  LOC100794850 (gma)  LOC100802004 (gma)  LOC100810854 (gma)  LOC100818651 (gma)  LOC101250477 (sly)  LOC101258169 (sly)  LOC103627357 (zma)  LOC103627657 (zma)  LOC103833692 (bra)  LOC103838027 (bra)  LOC103849200 (bra)  LOC103856991 (bra)  LOC103866498 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 2  (predict for NP_001318801.1)
nucl 6,  chlo 2,  cyto 2  (predict for NP_001332484.1)
nucl 6,  chlo 2,  cyto 2  (predict for NP_001332485.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001318801.1)
chlo 3  (predict for NP_001332484.1)
chlo 3  (predict for NP_001332485.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
ath04144 Endocytosis 2
Genes directly connected with AT5G55400 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.0 AT5G15740 O-fucosyltransferase family protein [detail] 831430
5.0 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein [detail] 838552
4.9 XIB myosin XI B [detail] 839246
Coexpressed
gene list		 [Coexpressed gene list for AT5G55400]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248082_at
248082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248082_at
248082_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248082_at
248082_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835633      
Refseq ID (protein) NP_001318801.1 
NP_001332484.1 
NP_001332485.1 


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