ATTED-II : GeneID search result

[←][→] ath AT5G55490 Gene

functional annotation

Function

gamete expressed protein 1

GO BP

GO:0009553 [list] [network] embryo sac development	(146 genes)	IMP
GO:0009555 [list] [network] pollen development	(337 genes)	IMP
GO:0009793 [list] [network] embryo development ending in seed dormancy	(547 genes)	IMP

GO CC

GO:0005887 [list] [network] integral component of plasma membrane	(171 genes)	ISS
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM

GO MF

GO:0042802 [list] [network] identical protein binding

(288 genes)

IDA

KEGG

Protein

NP_001318802.1 NP_001330002.1 NP_001330003.1 NP_001330004.1 NP_001330005.1 NP_001330006.1 NP_001330007.1 NP_001330008.1 NP_200360.2

BLAST

NP_001318802.1 NP_001330002.1 NP_001330003.1 NP_001330004.1 NP_001330005.1 NP_001330006.1 NP_001330007.1 NP_001330008.1 NP_200360.2

Orthologous

[Ortholog page] LOC4344223 (osa) LOC4347181 (osa) LOC11422135 (mtr) LOC11442163 (mtr) LOC25486889 (mtr) LOC25486895 (mtr) LOC25486900 (mtr) LOC100247755 (vvi) LOC100382002 (zma) LOC100792191 (gma) LOC100812661 (gma) LOC100814301 (gma) LOC100814482 (gma) LOC101266990 (sly) LOC103844985 (bra) LOC103856985 (bra) LOC112417249 (mtr) LOC112422621 (mtr)

Subcellular
localization
wolf

plas 6, vacu 3, nucl_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3	(predict for NP_001318802.1)
plas 4, golg_plas 3, vacu 3, golg 1, chlo 1, E.R. 1	(predict for NP_001330002.1)
vacu 6, chlo 1, extr 1, E.R. 1, golg 1, chlo_mito 1	(predict for NP_001330003.1)
vacu 6, chlo 1, extr 1, E.R. 1, golg 1, chlo_mito 1	(predict for NP_001330004.1)
plas 5, vacu 3, golg_plas 3, E.R._plas 3, mito_plas 3	(predict for NP_001330005.1)
plas 4, golg_plas 3, vacu 3, golg 1, chlo 1, E.R. 1	(predict for NP_001330006.1)
plas 4, golg_plas 3, vacu 3, golg 1, chlo 1, E.R. 1	(predict for NP_001330007.1)
vacu 6, chlo 1, extr 1, E.R. 1, golg 1, chlo_mito 1	(predict for NP_001330008.1)
plas 6, vacu 3, nucl_plas 3, cysk_plas 3, mito_plas 3, cyto_plas 3	(predict for NP_200360.2)

Subcellular
localization
TargetP

scret 7	(predict for NP_001318802.1)
scret 7	(predict for NP_001330002.1)
scret 7	(predict for NP_001330003.1)
scret 7	(predict for NP_001330004.1)
scret 7	(predict for NP_001330005.1)
scret 7	(predict for NP_001330006.1)
scret 7	(predict for NP_001330007.1)
scret 7	(predict for NP_001330008.1)
scret 7	(predict for NP_200360.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with GEX1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.3	DREB19	Integrase-type DNA-binding superfamily protein	[detail]	818414
4.1	PTEN1	Calcium/lipid-binding (CaLB) phosphatase	[detail]	833936
4.1	NAC103	NAC domain containing protein 103	[detail]	836527
3.6	TBL22	TRICHOME BIREFRINGENCE-LIKE 22	[detail]	822439

Coexpressed
gene list

[Coexpressed gene list for GEX1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248086_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248086_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248086_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835642
Refseq ID (protein)	NP_001318802.1
	NP_001330002.1
	NP_001330003.1
	NP_001330004.1
	NP_001330005.1
	NP_001330006.1
	NP_001330007.1
	NP_001330008.1
	NP_200360.2

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