[←][→] ath   AT5G55660 Gene
functional annotation
Function   DEK domain-containing chromatin associated protein  
GO BP
GO:2000779 [list] [network] regulation of double-strand break repair  (12 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0042393 [list] [network] histone binding  (72 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_200377.1 
BLAST NP_200377.1 
Orthologous [Ortholog page] AT3G48710 (ath)  AT4G26630 (ath)  AT5G63550 (ath)  LOC4327229 (osa)  LOC4333378 (osa)  LOC7471874 (ppo)  LOC11423522 (mtr)  LOC11435067 (mtr)  LOC25489146 (mtr)  LOC100245819 (vvi)  LOC100249691 (vvi)  LOC100281533 (zma)  LOC100779284 (gma)  LOC100785644 (gma)  LOC100788998 (gma)  LOC100812080 (gma)  LOC100812631 (gma)  LOC100813123 (gma)  LOC100817467 (gma)  LOC100818537 (gma)  LOC101249339 (sly)  LOC101250613 (sly)  LOC101254244 (sly)  LOC101264938 (sly)  LOC103626062 (zma)  LOC103643665 (zma)  LOC103650830 (zma)  LOC103834839 (bra)  LOC103837477 (bra)  LOC103845017 (bra)  LOC103851868 (bra)  LOC103866403 (bra)  LOC103873519 (bra)  LOC103873766 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_200377.1)
Subcellular
localization
TargetP
other 8  (predict for NP_200377.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G55660 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.3 AT4G26630 DEK domain-containing chromatin associated protein [detail] 828770
14.2 LINC3 little nuclei3 [detail] 843210
11.0 LINC4 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5);little nuclei4 [detail] 836706
11.0 AT4G08310 DNA ligase [detail] 826385
10.7 PRP40A pre-mRNA-processing protein 40A [detail] 841057
10.3 AT2G22795 hypothetical protein [detail] 816810
10.2 MBD10 methyl-CPG-binding domain 10 [detail] 838103
9.3 AT5G46070 Guanylate-binding family protein [detail] 834648
9.3 AT5G08450 zinc finger CCCH domain protein [detail] 830744
9.1 AT3G54760 dentin sialophosphoprotein-like protein [detail] 824641
8.9 FDM5 XH/XS domain-containing protein [detail] 844418
8.5 ELF8 binding protein [detail] 815177
8.0 AT4G11560 bromo-adjacent homology (BAH) domain-containing protein [detail] 826760
7.9 HOS15 WD-40 repeat family protein [detail] 836867
7.7 AT4G37820 transmembrane protein [detail] 829938
5.0 RING1A RING 1A [detail] 834451
Coexpressed
gene list		 [Coexpressed gene list for AT5G55660]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248070_at
248070_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248070_at
248070_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248070_at
248070_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835660      
Refseq ID (protein) NP_200377.1 


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