[←][→] ath   AT5G55840 Gene
functional annotation
Function   PPR superfamily protein  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO MF
KEGG
Protein NP_001331238.1  NP_001331239.1  NP_200395.2 
BLAST NP_001331238.1  NP_001331239.1  NP_200395.2 
Orthologous [Ortholog page] LOC7487550 (ppo)  LOC11437641 (mtr)  LOC100817407 (gma)  LOC101268166 (sly)  LOC103643672 (zma)  LOC103845025 (bra)  LOC104882717 (vvi)  LOC107280481 (osa) 
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto 1,  E.R. 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001331238.1)
cyto 5,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001331239.1)
chlo 7,  mito 1,  cyto 1,  E.R. 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_200395.2)
Subcellular
localization
TargetP
mito 3,  scret 3  (predict for NP_001331238.1)
other 8  (predict for NP_001331239.1)
mito 3,  scret 3  (predict for NP_200395.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G55840 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT2G03140 alpha/beta-Hydrolases superfamily protein [detail] 814843
6.1 MEE44 Nucleotidyltransferase family protein [detail] 828214
6.1 AT1G62914 pentatricopeptide (PPR) repeat-containing protein [detail] 10723105
4.2 AT4G10550 Subtilase family protein [detail] 826647
Coexpressed
gene list		 [Coexpressed gene list for AT5G55840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248024_at
248024_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248024_at
248024_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248024_at
248024_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835678      
Refseq ID (protein) NP_001331238.1 
NP_001331239.1 
NP_200395.2 


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