[←][→] ath   AT5G56280 Gene
functional annotation
Function   COP9 signalosome subunit 6A  
GO BP
GO:0010387 [list] [network] COP9 signalosome assembly  (6 genes)  IMP  
GO:0000338 [list] [network] protein deneddylation  (11 genes)  IEA  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IEA  
GO:0009640 [list] [network] photomorphogenesis  (71 genes)  TAS  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IMP  
GO:0030163 [list] [network] protein catabolic process  (603 genes)  TAS  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IMP  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (12 genes)  IBA IPI TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  TAS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_568839.1 
BLAST NP_568839.1 
Orthologous [Ortholog page] CSN6B (ath)  LOC4345944 (osa)  LOC25488496 (mtr)  LOC100246357 (vvi)  LOC100283126 (zma)  LOC100284689 (zma)  LOC100786026 (gma)  LOC100797079 (gma)  LOC101259087 (sly)  LOC103845068 (bra)  LOC103861629 (bra)  LOC103866136 (bra) 
Subcellular
localization
wolf
chlo 6,  vacu 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_568839.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_568839.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
ath03050 Proteasome 2
Genes directly connected with CSN6A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 CSN6B COP9 signalosome subunit 6B [detail] 828749
6.3 PHP PLANT HOMOLOGOUS TO PARAFIBROMIN [detail] 821831
5.9 FUS6 COP9 signalosome complex subunit 1 [detail] 825286
Coexpressed
gene list		 [Coexpressed gene list for CSN6A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248009_at
248009_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248009_at
248009_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248009_at
248009_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835727      
Refseq ID (protein) NP_568839.1 


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