ATTED-II : GeneID search result

[←][→] ath AT5G56610 Gene

functional annotation

Function

Phosphotyrosine protein phosphatases superfamily protein

GO BP

GO:0006470 [list] [network] protein dephosphorylation

(133 genes)

ISS

GO CC

GO:0005737 [list] [network] cytoplasm

(14855 genes)

ISM

GO MF

GO:0008962 [list] [network] phosphatidylglycerophosphatase activity	(3 genes)	IDA IGI
GO:0008138 [list] [network] protein tyrosine/serine/threonine phosphatase activity	(16 genes)	IEA
GO:0004725 [list] [network] protein tyrosine phosphatase activity	(23 genes)	IEA

KEGG

Protein

NP_001032084.1 NP_200472.2

BLAST

NP_001032084.1 NP_200472.2

Orthologous

[Ortholog page] LOC4327199 (osa) LOC4340154 (osa) LOC11408099 (mtr) LOC100255975 (vvi) LOC100282515 (zma) LOC100383730 (zma) LOC100786889 (gma) LOC100817410 (gma) LOC101262592 (sly) LOC103845095 (bra)

Subcellular
localization
wolf

cyto 4, pero 4, nucl 1	(predict for NP_001032084.1)
cyto 3, pero 3, cyto_pero 3, mito 1, cyto_plas 1	(predict for NP_200472.2)

Subcellular
localization
TargetP

other 9	(predict for NP_001032084.1)
other 9	(predict for NP_200472.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G56610 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.9	AT5G19930	integral membrane protein (Protein of unknown function DUF92, transmembrane)	[detail]	832115
6.8	AT2G42390	kinase C substrate, heavy chain-like protein	[detail]	818840
6.1	AT2G40600	appr-1-p processing enzyme family protein	[detail]	818655
4.5	AT3G07580	hypothetical protein	[detail]	819949

Coexpressed
gene list

[Coexpressed gene list for AT5G56610]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247966_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247966_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247966_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835762
Refseq ID (protein)	NP_001032084.1
Refseq ID (protein)	NP_200472.2

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