[←][→] ath   AT5G56680 Gene
functional annotation
Function   Class II aminoacyl-tRNA and biotin synthetases superfamily protein  
GO BP
GO:0006421 [list] [network] asparaginyl-tRNA aminoacylation  (4 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP NAS  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004816 [list] [network] asparagine-tRNA ligase activity  (4 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG ath00970 [list] [network] Aminoacyl-tRNA biosynthesis (94 genes)
Protein NP_200479.1 
BLAST NP_200479.1 
Orthologous [Ortholog page] ats1 (sly)  SYNC3 (ath)  LOC4325717 (osa)  LOC11412373 (mtr)  LOC11434753 (mtr)  LOC100257593 (vvi)  LOC100281485 (zma)  LOC100790605 (gma)  LOC100804064 (gma)  LOC103845100 (bra)  LOC103856804 (bra) 
Subcellular
localization
wolf
chlo 6,  cyto 4  (predict for NP_200479.1)
Subcellular
localization
TargetP
other 6  (predict for NP_200479.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
Genes directly connected with SYNC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AT5G20890 TCP-1/cpn60 chaperonin family protein [detail] 832213
7.7 MSI1 Transducin/WD40 repeat-like superfamily protein [detail] 835935
7.4 AT1G36310 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 840538
6.2 ADT2 arogenate dehydratase 2 [detail] 819954
4.9 ECT4 evolutionarily conserved C-terminal region 4 [detail] 841997
Coexpressed
gene list		 [Coexpressed gene list for SYNC1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 835769      
Refseq ID (protein) NP_200479.1 


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