[←][→] ath   AT5G57900 Gene
functional annotation
Function   SKP1 interacting partner 1  
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_568870.1 
BLAST NP_568870.1 
Orthologous [Ortholog page] LOC4345135 (osa)  LOC7489437 (ppo)  LOC11444176 (mtr)  LOC100257095 (vvi)  LOC100787875 (gma)  LOC103845227 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  plas 1  (predict for NP_568870.1)
Subcellular
localization
TargetP
other 8  (predict for NP_568870.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
ath00941 Flavonoid biosynthesis 2
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Genes directly connected with SKIP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 UBC32 ubiquitin-conjugating enzyme 32 [detail] 820956
5.6 ZAT zinc transporter [detail] 819293
5.3 AT5G06370 NC domain-containing protein-like protein [detail] 830525
4.9 AT5G57910 ribosomal RNA small subunit methyltransferase G [detail] 835902
Coexpressed
gene list		 [Coexpressed gene list for SKIP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247863_at
247863_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247863_at
247863_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247863_at
247863_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835901      
Refseq ID (protein) NP_568870.1 


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