ATTED-II : GeneID search result

[←][→] ath AT5G58130 Gene

functional annotation

Function

RNA-binding (RRM/RBD/RNP motifs) family protein

GO BP

GO:0080111 [list] [network] DNA demethylation	(12 genes)	IMP
GO:0016458 [list] [network] gene silencing	(216 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA IDA ISM

GO MF

GO:0003723 [list] [network] RNA binding

(1790 genes)

IDA

KEGG

Protein

NP_200621.1

BLAST

NP_200621.1

Orthologous

[Ortholog page] LOC4328244 (osa) LOC11422911 (mtr) LOC100273064 (zma) LOC100778779 (gma) LOC100808161 (gma) LOC101264344 (sly) LOC101264949 (sly) LOC103845247 (bra) LOC104879881 (vvi) LOC109120715 (sly)

Subcellular
localization
wolf

nucl 10

(predict for NP_200621.1)

Subcellular
localization
TargetP

other 9

(predict for NP_200621.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3

Genes directly connected with ROS3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.4	AT5G06110	DnaJ and myb-like DNA-binding domain-containing protein	[detail]	830498
7.2	SDN3	small RNA degrading nuclease 3	[detail]	836859
6.4	AT2G17410	ARID/BRIGHT DNA-binding domain-containing protein	[detail]	816247
6.3	CPSF73-I	cleavage and polyadenylation specificity factor 73-I	[detail]	842393

Coexpressed
gene list

[Coexpressed gene list for ROS3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247849_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247849_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247849_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835925
Refseq ID (protein)	NP_200621.1

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